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In Stock Series | From “Analysis” to “Construction”: How DBCO-dT-CE Phosphoramidite Empowers Nucleic Acids with Functional Versatility

2025/11/11 15:18:30 Browse volume(29)


Nucleoside Raw Materials

DBCO-dT-CE Phosphoramidite


I. From 'Analytical Mechanisms' to 'Constructing Functions'

In our previous content, we delved into how to use 8-oxo-dG-CE Phosphoramidite (143060-53-1) to precisely simulate oxidative damage at specific sites on DNA strands, helping researchers analyze the intrinsic mechanisms of diseases such as aging and cancer.

The charm of life science lies not only in 'understanding' but also in 'creation'. In this issue, we shift our focus from 'inward exploration' to 'outward construction'—how to actively endow oligonucleotides, the blueprint of life, with new functions, making them powerful molecular machines that can luminesce, target, and treat.



II. The Need for 'Secondary Development' of Oligonucleotides

Natural oligonucleotide structures are stable and precisely recognizable, but to achieve broader research or therapeutic functions, it is necessary to introduce chemically controllable 'reaction sites' on them:

  • Construct fluorescent probes or molecular reporting systems;

  • Conjugate drugs or ligands to form nucleic acid drug conjugates (ApDC);

  • Connect material modules to build DNA nanostructures or intelligent carriers;

The key to achieving all this is to find an efficient, stable, and site-specific connection strategy.



III. DBCO Click Chemistry Principles × Molecular Design of DBCO-dT

Among numerous conjugation strategies, copper-free click chemistry (SPAAC) has become a mainstream solution due to its high selectivity, mild conditions, and biocompatibility.

The core reaction is the cycloaddition between the DBCO (Dibenzocyclooctyne) group and the azide (–N?) group, forming a stable triazole ring structure.

The entire reaction requires no metal catalyst, can proceed in aqueous phase and at room temperature, and does not disrupt biological activity or introduce toxic ions.

This makes DBCO an ideal interface for 'connecting biomolecules with functional molecules'.

The design logic of DBCO-dT-CE Phosphoramidite is precisely to 'pre-embed' this reaction site into the DNA strand.



IV. Working Principle

During solid-phase DNA synthesis, researchers can insert DBCO-dT-CE Phosphoramidite into the target position just like using ordinary bases.

After synthesis is completed, this site carries a 'DBCO handle':

1. This handle can undergo click reactions with azide-modified molecules (such as dyes, biotin, PEG, or drugs);

2. The reaction conditions are mild (room temperature/aqueous solution) and require no copper ion catalysis;

3. Ultimately, a covalent and stable linkage is formed;

By presetting the DBCO site during DNA synthesis, precise and controllable molecular conjugation can be achieved.

DBCO-dT-CE Phosphoramidite acts like a 'universal interface' in oligonucleotides, making subsequent functional design more efficient and free.



V. Product Overview

DBCO-dT-CE Phosphoramidite Structural Formula

Chinese Name: DBCO-dT-CE Phosphoramidite

English Name: 5'-Dimethoxytrityl-5-[(6-oxo-6-(dibenzo[b,f]azacyclooct-4-yn-1-yl)-capramido-N-hex-6-yl)-3-acrylimido]-2'-deoxyUridine,3'-[(2-cyanoethyl)-(N,N-diisopropyl)]-phosphoramidite

Abbreviation: DBCO-dT-CE Phosphoramidite

CAS Number: NA

Molecular Formula: C69H80N7O11P

Molecular Weight: 1214.41

Specification: 100 mg / 500 mg / 1 g (custom packaging supported)

Form: Off-white powder

Product Number: G09010021

DBCO-dT-CE Phosphoramidite is a key raw material for the functional construction of oligonucleotides. It can efficiently conjugate with various functional molecules through copper-free click chemistry and is widely used in probe, drug, and nanotechnology research.



VI. Application Scenarios

1. Nucleic Acid Drug Development: Construct targeted ASO, siRNA, or Aptamer-drug conjugates (ApDC);

2. Molecular Diagnostic Probes: Construct FISH probes, real-time fluorescent probes, NGS library adapters;

3. Nanobiotechnology: DNA origami, molecular sensors, nanocarriers;

By presetting DBCO sites during nucleic acid synthesis, researchers can efficiently construct structurally precise and functionally diverse nucleic acid systems, significantly improving experimental efficiency and structural controllability.




Extended Services

From 'analyzing damage' to 'constructing functions', Shenzhen GeneSeqTools Bioscience & Technology Co. Ltd. is committed to providing key tools for every step of nucleic acid research.

For high-quality nucleoside raw materials or custom packaging services, please call +86 13302967066!

Shenzhen GeneSeqTools Bioscience & Technology Co. Ltd. is dedicated to providing reliable domestic alternative solutions for gene sequencing, molecular diagnosis, and microbial detection.

For related products such as blood cell dyes and buffer salts, you can check the complete product line and technical specifications on the [MedSun Biotechnology Website].


In Vitro Molecular Diagnosis | Gene Sequencing | Microbial Detection
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Shenzhen GeneSeqTools Bioscience & Technology Co. Ltd.

Founded in 2015, it is a high-tech enterprise focusing on microbial testing gene sequencing and in vitro molecular diagnostics in the R&D, production, and sales of biochemical reagent raw materials. Committed to providing high-quality biochemical reagent raw materials and professional custom synthesis services, the product portfolio covers more than a dozen categories and nearly a thousand innovative products. Upholding the core philosophy of “customer first, integrity and professionalism”, we serve with dedication to meet customers’ diverse needs in research and testing.

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